Skip to main content
The W.G. Jackson on an aquatic science cruise

Vessel Program Curriculum Guide

Big Ideas and Driving Questions

  • How are different lakes and rivers similar and different in their physical, chemical, and biological characteristics?
  • How do people use Michigan's water resources?
  • How do human activities influence the quality of lakes and rivers?
  • How do aquatic ecosystems play an important role in terrestrial ecosystems, and vice versa?
  • How do aquatic scientists explore questions about water quality?
Student scientists looking at a water sample on the D.J. Angus
Participants on the research deck of the W.G. Jackson as it sails across the lake
D.J. Angus at home port dock on Grand River

Vessel Curriculum Overview

Muskegon Lake

Ariel photograph of Muskegon Lake

Spring Lake

Map of the Major Watersheds of the Grand River

What is Water Quality?

Water quality is defined in terms of physical, chemical, and biological parameters with respect to a certain use. For instance, acceptable water quality for warm water fishes would not be optimal for cold water fishes, and standards for drinking water differ from those for boating and recreation. No single factor alone indicates good water quality, and water quality in a body of water can vary with the season and location. Long-term water quality measurements from well-defined locations are needed to tell if conditions are changing or remaining the same. Many of the procedures performed on the vessel help us to understand the quality of the waters being sampled.

Student scientist pouring water into a turbidity tube on the back deck of the D.J. Angus
Student standing on the deck of the W.G. Jackson holding a VanDorn water bottle

Chemical Characteristics of Water Quality

Chemical characteristics of water quality measured on the vessel include: pH, conductivity, dissolved oxygen, alkalinity, and nutrients.

Student scientists working inside the lab on the D.J. Angus

The pH scale is a series of numbers ranging from 0 to 14 which denote various degrees of acidity. A natural body of water can be acidic, neutral, or basic. Many factors influence pH, including the composition of the material forming the basin holding the water, acidity of rain falling into the water, and the condition of water flowing into the body of water from streams, rivers, or storm runoff. A pH between 6.7 and 8.6 will support a well-balanced fish population, though different species prefer different pH values within this range. Very few species can tolerate pH values less than 5.0 or greater than 9.0. Lake Michigan water samples typically have a pH range of 7.0 to 8.6. A pH meter is used to measure pH on the vessels.

Conductivity, or specific conductance, is the measure of the water's ability to conduct an electrical current. Conductivity depends upon the number of ions, or charged particles, in the water. Factors that influence conductivity are human activities such as road salt, agriculture, and septic systems. Conductivity influences what organisms can live in the water and can be an indicator of other kinds of pollution. A conductivity meter is used to measure this parameter. 

Dissolved oxygen measures how much oxygen is available to organisms in the water. Most aquatic organisms are highly dependent upon dissolved oxygen and will experience stress when levels fall below about 3ppm (parts per million). Some fish, such as salmon and lake trout, have high oxygen needs while bullhead and carp can tolerate very low oxygen conditions. 

The distribution of dissolved oxygen within an aquatic environment varies horizontally, vertically, and with time. Its distribution is dependent upon atmospheric contact, wave and current actions, thermal phenomena, waste inputs, biological activity, and other characteristics of a lake or stream. Dissolved oxygen levels are temperature and pressure dependent; cold water has the capacity to hold more oxygen than warm water. Photosynthesis by plants contributes to an increase in dissolved oxygen levels during the day. However, there are biological processes in water that consume oxygen such as respiration by organisms and decomposition of organic matter by microorganisms. In summer, there are times when the dissolved oxygen at the bottom of Spring Lake approaches zero. During spring and fall turnovers, horizontal and vertical variation of dissolved oxygen is likely to be less than during the summer.

Onboard, we use a chemical titration, the Azide Modification of the Winkler Method, to measure dissolved oxygen. Personal protective equipment (goggles and gloves) must be worn during this test.

Alkalinity is a measure of the capacity of water to neutralize acids. This is also known as the buffering capacity of water, or the ability of water to resist a decrease in pH when acid is added. Acid additions generally come from rain or snow, though soil sources are also important in some places. Alkalinity increases as water dissolves rocks containing calcium carbonate, such as calcite and limestone. Algae and industrial activity can also influence alkalinity. When a lake or stream has low alkalinity, a large influx of acids from an intense rainfall or rapid snowmelt event could result in a drop of the pH of the water, which could be harmful for organisms or human uses. 

Michigan experiences acid rain (precipitation with a pH less than 5.6), yet lakes in our area are not very negatively impacted - why? The limestone in the Lake Michigan basin is a natural buffer that increases the alkalinity of waters in our area and helps to maintain soil and water pH near or above neutral. By contrast, Lake Superior has more granitic bedrock, which results in lower alkalinity in the basin’s lakes, and greater susceptibility to negative impacts from acid rain.

Nitrogen and phosphorus are nutrients that are natural parts of aquatic ecosystems. They are necessary for the growth of algae and aquatic plants, which provide food and habitat for fish, shellfish, and smaller organisms that live in water. But elevated levels of nutrients can lead to eutrophication, algae blooms, and low oxygen conditions. Nutrients in lakes can be increased by human activities such as agriculture, urban runoff, and sewer discharge. Nutrients are measured on advanced cruises only, but their impacts and implications are discussed on all.

Biological Characteristics of Water

Biological characteristics of water quality measured on the vessel include: sediment and benthic organisms and plankton.

Plankton under microscope

On AWRI’s vessels, the PONAR grab sampler helps teachers and students explore the mysteries of West Michigan aquatic ecosystems firsthand, by taking a bite out of the sediment at the bottom of the lake and bringing it up for us to view. We can tell a lot about a lake by the kind of material the bottom is made of, and who is living in or on it. Muskegon and Spring Lake tend to have dark, mucky sediment, while Lake Michigan is sandy. Poking through the sediment looking for living organisms is the highlight of a cruise for many passengers. We often find bloodworms (the larval form of the midge fly), phantom midges, tubifex worms, biting midges, and zebra and quagga mussel shells (or infrequently, living mussels).

Plankton are microscopic organisms distributed throughout the lake. They are found at all depths and have both plant (phytoplankton) and animal (zooplankton) forms. Both the density and the diversity of plankton are important to scientists. Plankton density is a measure of how much plankton is in the water, while diversity refers to how many different species can be observed. Plankton show a distribution pattern that can be associated with the time of day and seasons. 

Plankton is the base of the food chain for Lake Michigan. The phytoplankton are the producers, and include green algae, cyanobacteria, and diatoms. Cyanobacteria, such as Microcystis, prefer warm water and high nutrients. Some cyanobacteria can fix nitrogen and produce toxins, which can present issues during a harmful algal bloom (or HAB). Zooplankton are the consumers and include tiny crustaceans such as water fleas (Daphnia), cyclops, and copepods. 

A plankton sample will be gathered using a net with very fine mesh that allows water to pass through but collects the plankton organisms. This concentrated sample will be measured for density using a graduated cylinder with a Secchi disk pattern at the bottom, and later viewed under a microscope to see what species can be identified. This is often among the most exciting parts of a cruise, to witness the profusion of life found in a small drop of water!

Lake Stratification

Graphic showing the seasonal changes for lakes with stratification

Temperature profiles sometimes show that the warm water surface layer often ends abruptly, with the temperature going rapidly from warm to cool, which is called a thermocline. The thermocline is the zone where there is a rapid temperature change, and thermoclines are observed when a lake is stratified. Lake stratification refers to the formation of distinct layers of water that do not mix with each other due to density differences. In temperate climates, many lakes are stratified during the summer, with large temperature differences between the layers of water.

As heat from the sun increases during the summer, the upper waters of the lake become warmer and lighter than deeper waters. One very important consequence of summer stratification is that circulation due to wind action is largely confined to the upper layer of water. Because the lower water mass is isolated from the atmosphere and receives little, if any, sunlight, dissolved oxygen is not replenished in this water mass. The dissolved oxygen may diminish to such a level that it limits aquatic life.

By contrast, in the fall and spring, the temperature of the lake is essentially uniform from top to bottom. This occurs when the power of the sun is reduced such that wave action on the surface will mix oxygen in the air with the water. The oxygen-rich water is driven down to lower depths, and the bottom oxygen-poor water will be brought to the surface where it can be replenished with oxygen. Turnover is also not uniform in a lake, and strong winds can cause upwellings where nutrient rich deep water moves towards the surface.

Muskegon Lake tends to follow this pattern. Since this occurs twice per year in spring and fall, these kinds of lakes are said to be dimictic; “di” meaning two and “mictic” meaning “to mix”. Because Spring Lake is shallow and a riverine system, the stratification breaks down several times throughout the summer. Every time this happens, the lake turns over. Since it mixes many times per year, we call it polymictic. Since Lake Michigan never completely freezes over, it technically only mixes once per year (fall), making it monomictic.

There are a dozen GVSU faculty members with labs at AWRI, who are doing research on a wide variety of topics within the field of aquatic science:

Page last modified April 20, 2026